Vybrané publikace - Teoretické oddělení


• D. Lips, A. Ryabov, and P. Maass 
Single-file transport in periodic potentials: The Brownian asymmetric simple exclusion process
Phys. Rev. E 100, 052121 2019. https://doi.org/10.1103/PhysRevE.100.052121 

• D. Geiss, K. Kroy, and V. Holubec 
Brownian molecules formed by delayed harmonic interactions
New J. Phys. 21, 093014, 2019. https://doi.org/10.1088/1367-2630/ab3d76 

• V. Holubec and T. Novotný 
Effects of noise-induced coherence on the fluctuations of current in quantum absorption refrigerators
J. Chem. Phys. 151, 044108, 2019. https://doi.org/10.1063/1.5096275 

• A. Ryabov, V. Holubec, and E. Berestneva
Living on the edge of instability 
J. Stat. Mech. 2019, 084014, 2019. https://doi.org/10.1088/1742-5468/ab333f 

• M. Kolář, A. Ryabov, and R. Filip 
Heat capacities of thermally manipulated mechanical oscillator at strong coupling  
Sci. Rep. 9, 10855, 2019. https://doi.org/10.1038/s41598-019-47288-0 

• A. Choukourov, P. Pleskunov, D. Nikitin, R. Tafiichuk, A. Shelemin, J. Hanuš, J. Májek, M. Unger, A. Roy, and A. Ryabov 
Plasma-assisted growth of polyethylene fractal nano-islands on polyethylene oxide films: Impact of film confinement and glassy dynamics on fractal morphologies 
Appl. Surf. Sci. 489, 55-65, 2019. https://doi.org/10.1016/j.apsusc.2019.05.287 

• V. Holubec, K. Kroy, and S. Steffenoni 
Physically consistent numerical solver for time-dependent Fokker-Planck equations 
Phys. Rev. E 99, 032117, 2019. https://doi.org/10.1103/PhysRevE.99.032117 

• A. Ryabov, D. Lips, and P. Maass 
Counterintuitive Short Uphill Transitions in Single-File Diffusion 
J. Phys. Chem. C 123, 5714, 2019. https://doi.org/10.1021/acs.jpcc.8b12081  

• V. Holubec, A. Ryabov,   
Účinné, výkonné a spolehlivé tepelné motory se musejí točit 
Československý časopis pro fyziku, ročník 2019, svazek 69, číslo 1, stránka 8, rubrika Aktuality. https://ccf.fzu.cz/pdf/ukazky/2019/ukazka_CCF_1-19.pdf 


• M. Šiler, L. Ornigotti, O. Brzobohatý, P. Jákl, A. Ryabov, V. Holubec, P. Zemánek, and R. Filip 
Diffusing Up the Hill: Dynamics and Equipartition in Highly Unstable Systems
Phys. Rev. Lett. 121, 230601, 2018. https://doi.org/10.1103/PhysRevLett.121.230601   

• D. Lips, A. Ryabov, and P. Maass 
Brownian Asymmetric Simple Exclusion Process 
Phys. Rev. Lett. 121, 160601, 2018. https://doi.org/10.1103/PhysRevLett.121.160601 

• U. Khadka, V. Holubec, H. Yang, and F. Cichos 
Active particles bound by information flows 
Nature Commun. 9, 3864, 2018. https://doi.org/10.1038/s41467-018-06445-1 

• V. Holubec and A. Ryabov 
Cycling Tames Power Fluctuations near Optimum Efficiency 
Phys. Rev. Lett. 121, 120601, 2018. https://doi.org/10.1103/PhysRevLett.121.120601 

• V. Holubec and T. Novotný 
Effects of Noise-Induced Coherence on the Performance of Quantum Absorption Refrigerators 
J. Low. Temp. Phys. 192147, 2018. https://doi.org/10.1007/s10909-018-1960-x 

• L. Ornigotti, A. Ryabov, V. Holubec, and R. Filip 
Brownian motion surviving in the unstable cubic potential and the role of Maxwells demon 
Phys. Rev. E 97, 032127, 2018. https://doi.org/10.1103/PhysRevE.97.032127 


• V. Holubec and A. Ryabov 
Diverging, but negligible power at Carnot efficiency: theory and experiment 
Phys. Rev. E 96, 062107, 2017. https://doi.org/10.1103/PhysRevE.96.062107 

• V. Holubec and A. Ryabov 
Work and power fluctuations in a critical heat engine 
Phys. Rev. E 96, 030102, 2017. https://doi.org/10.1103/PhysRevE.96.030102 

• M. Šiler, P. Jákl, O. Brzobohatý, A. Ryabov, R. Filip and P. Zemánek 
Thermally induced micro-motion by inflection in optical potential 
Sci. Rep. 7, 1697, 2017. https://doi.org/10.1038/s41598-017-01848-4

• M. Kolář, A. Ryabov and R. Filip 
Optomechanical oscillator controlled by variation in its heat bath temperature 
Phys. Rev. A 95, 042105, 2017. https://doi.org/10.1103/PhysRevA.95.042105

• V. Holubec, A. Ryabov, M. H. Yaghoubi, M. Varga, A. Khodaee, M. E. Foulaadvand and P. Chvosta 
Thermal ratchet effect in confining geometries 
Entropy 19, 119, 2017. https://doi.org/10.3390/e19040119 


• A. Ryabov, P. Zemánek and R. Filip 
Thermally induced passage and current of particles in a highly unstable optical potential 
Phys. Rev. E 94, 042108, 2016. https://doi.org/10.1103/PhysRevE.94.042108 

• A. Ryabov, V. Holubec, M. H. Yaghoubi, M. Varga, M. E. Foulaadvand and P. Chvosta 
Transport coefficients for a confined Brownian ratchet operating between two heat reservoirs 
J. Stat. Mech. 2016, 093202, 2016. http://dx.doi.org/10.1088/1742-5468/2016/09/093202 

• V. Holubec and A. Ryabov 
Maximum efficiency of low-dissipation heat engines at arbitrary power 
J. Stat. Mech. 2016, 073204, 2016. http://dx.doi.org/10.1088/1742-5468/2016/07/073204 

• M. Kolář, A. Ryabov and R. Filip 
Extracting work from quantum states of radiation 
Phys. Rev. A 93, 063822, 2016. http://dx.doi.org/10.1103/PhysRevA.93.063822

• A. Ryabov and V. Holubec 
Maximum efficiency of steady-state heat engines at arbitrary power 
Phys. Rev. E 93, 050101(R), 2016. http://dx.doi.org/10.1103/PhysRevE.93.050101 


• V. Holubec and A. Ryabov 
Efficiency at and near maximum power of low-dissipation heat engines 
Phys. Rev. E 92, 052125, 2015. http://dx.doi.org/10.1103/PhysRevE.92.052125 
arxiv preprint

• V. Holubec, M. Dierl, M. Einax, P. Maass, P. Chvosta and A. Ryabov 
Asymptotics of work distribution for a Brownian particle in a time-dependent anharmonic potential 
Phys. Scripta 2015, 014024, 2015. http://dx.doi.org/10.1088/0031-8949/2015/T165/014024

• A. Ryabov, E. Berestneva and V. Holubec 
Brownian motion in time-dependent logarithmic potential: Exact results for dynamics and first-passage properties 
J. Chem. Phys. 143, 114117, 2015. http://dx.doi.org/10.1063/1.4931474 
arxiv preprint

• V. Holubec, D. Lips, A. Ryabov, P. Chvosta and P. Maass 
On asymptotic behavior of work distributions for driven Brownian motion 
Eur. Phys. J. B 88, 340, 2015. http://dx.doi.org/10.1140/epjb/e2015-60635-x 
arxiv preprint

• A. Ryabov 
Single-File System with Absorbing Boundary: Tracer Dynamics and First-Passage Properties 
Biophys. Rev. Lett. 10, 85, 2015. http://dx.doi.org/10.1142/S179304801550006X


• V. Holubec 
An exactly solvable model of a stochastic heat engine: optimization of power, power fluctuations and efficiency 
J. Stat. Mech, P05022, 2014. http://dx.doi.org/10.1088/1742-5468/2014/05/P05022 
arxiv preprint

• S. Nostheide, V. Holubec, P. Chvosta and P. Maass 
Unfolding kinetics of periodic DNA hairpins 
J. Phys.: Condens. Matter 26, 205102, 2014. http://dx.doi.org/10.1088/0953-8984/26/20/205102 
arxiv preprint

• M. Dierl, M. Einax, P. Chvosta, W. Dieterich, P. Maass 
Collective transport in a peristaltic rathcet system 
J. Phys.: Conf. Ser. 490, 012184, 2014. http://dx.doi.org/10.1088/1742-6596/490/1/012184

• A. Ryabov, P. Chvosta 
Tracer dynamics in a single-file system with absorbing boundary 
Phys. Rev. E 89, 022132, 2014. http://dx.doi.org/10.1103/PhysRevE.89.022132 
arxiv preprint

• A. Ryabov 
Zero-range process with finite compartments: Gentile’s statistics and glassiness
Phys. Rev. E 89, 022115, 2014. http://dx.doi.org/10.1103/PhysRevE.89.022115 
arxiv preprint


• A. Ryabov 
Single-file diffusion in an interval: first-passage properties 
J. Chem. Phys. 138, 154104, 2013. http://dx.doi.org/10.1063/1.4801326 
arxiv preprint

• A. Ryabov, M. Dierl, P. Chvosta, M. Einax, P. Maass 
Work distribution in a time-dependent logarithmic-harmonic potential: exact results and asymptotic analysis 
J. Phys. A: Math. Theor. 46, 075002, 2013. http://dx.doi.org/10.1088/1751-8113/46/7/075002 
arxiv preprint


• V. Holubec, P. Chvosta, P. Maass 
Dynamics and energetics for a molecular zipper model under external driving 
J. Stat. Mech. 2012, P11009, 2012. http://dx.doi.org/10.1088/1742-5468/2012/11/P11009 

• A. Ryabov, P. Chvosta 
Survival of interacting Brownian particles in crowded one-dimensional environment 
J. Chem. Phys. 136, 064114, 2012. http://dx.doi.org/10.1063/1.3684954 


• A. Ryabov, P. Chvosta 
Single-file diffusion of externally driven particles 
Phys. Rev. E 83, 020106, 2011. http://dx.doi.org/10.1103/PhysRevE.83.020106 

• V. Holubec, P. Chvosta, M. Einax, P. Maass 
Attempt time Monte Carlo: An alternative for simulation of stochastic jump processes with time-dependent transition rates 
Europhys. Lett. 93, 40003, 2011. http://dx.doi.org/10.1209/0295-5075/93/40003 


• P. Chvosta, M. Einax, V. Holubec, A. Ryabov, P. Maass 
Energetics and performance of a microscopic heat engine based on exact calculations of work and heat distributions 
J. Stat. Mech. 2010, P03002, 2010. http://dx.doi.org/10.1088/1742-5468/2010/03/P03002 

• P. Chvosta, V. Holubec, A. Ryabov, M. Einax, P. Maass 
Thermodynamics of two-stroke engine based on periodically driven two-level system 
Physica E 42, 472, 2010. http://dx.doi.org/10.1016/j.physe.2009.06.031